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CVE-2026-31969

27
FAUCET Score

CVE-2026-31969 is a high-severity heap buffer overflow vulnerability affecting HTSlib versions prior to 1.23.1, 1.22.2, and 1.21.1. This flaw occurs when processing specially crafted CRAM bioinformatics files, leading to an out-by-one error that can cause program crashes, data corruption, or potentially arbitrary code execution. Exploitation requires user interaction, such as opening a malicious file, but has low attack complexity, resulting in a CVSS score of 8.1. There is currently no evidence of active exploitation, public exploit code, or significant community discussion regarding this vulnerability.

Impacted Technologies

VendorProductVersion(s)CPE
< 1.21.1CPE matchmatch criteria
cpe:2.3:a:htslib:htslib:*:*:*:*:*:*:*:*
>= 1.22, < 1.22.2CPE matchmatch criteria
cpe:2.3:a:htslib:htslib:*:*:*:*:*:*:*:*
1.23CPE matchmatch criteria
cpe:2.3:a:htslib:htslib:1.23:*:*:*:*:*:*:*

CVSS Data

CVSS version used by this source: 4.0

7.1HIGH

CVSS:4.0/AV:N/AC:L/AT:N/PR:N/UI:P/VC:N/VI:H/VA:L/SC:N/SI:N/SA:N/E:X/CR:X/IR:X/AR:X/MAV:X/MAC:X/MAT:X/MPR:X/MUI:X/MVC:X/MVI:X/MVA:X/MSC:X/MSI:X/MSA:X/S:X/AU:X/R:X/V:X/RE:X/U:X

Attack Vector
NETWORK
Attack Complexity
LOW
Attack Requirements
NONE
Privileges Required
NONE
User Interaction
PASSIVE
VS Confidentiality
NONE
VS Integrity
HIGH
VS Availability
LOW
SS Confidentiality
NONE
SS Integrity
NONE
SS Availability
NONE
Exploit Maturity
NOT_DEFINED
CvssVersion
4.0

Exploit Intelligence

EPSS Score
0.34%
Probability of exploitation in next 30 days
EPSS Percentile
26.0%
Percentile rank of EPSS score among Peer Group
As of 2026-07-27
Model: v2026.06.15
This CVE's current EPSS score of 0.0034 is in the 31st percentile among its peer group of 14,855 CVEs.

Social Chatter

The average CVE in this peer group has 0.0 Twitter, 0.1 Reddit, 0.2 Bluesky, 0.1 Mastodon, and 0.2 GitHub mentions.

Media Mentions

No media coverage found for this CVE.

The average CVE in this peer group has 0.3 InfoSec Media, 0.0 Vendor Blog, and 0.1 Security Researcher mentions.

Remediation

Remediation records are not available for this CVE.

References

github.com / samtools/htslib/commit/88cdf69e4b83bb550ab4f6f7134892c2ad1978f4
Patch
github.com / samtools/htslib/security/advisories/GHSA-q4cj-f4h5-fqgc
PatchVendor Advisory