Predictive Vulnerability Intelligence.

Product

  • Product
  • Pricing
  • Documentation

Company

  • About
  • Partnerships
  • Blog
  • Support

Legal

  • Terms
  • Privacy
  • Data Licensing

© 2026 FAUCET Technologies LLC. All rights reserved.

CVE-2026-31966

27
FAUCET Score

CVE-2026-31966 is a critical out-of-bounds read vulnerability in the HTSlib bioinformatics library, specifically affecting the `cram_decode_seq()` function when processing CRAM files. This flaw allows an attacker to remotely leak arbitrary data, including program state, or cause a program crash due to insufficient validation of feature data series. Rated 9.1 CRITICAL (CVSS:3.1/AV:N/AC:L/PR:N/UI:N/S:U/C:H/I:N/A:H), it can be exploited with low complexity and no user interaction. There is currently no evidence of active exploitation, public exploit code, or significant community discussion regarding this vulnerability. Organizations using HTSlib versions prior to 1.23.1, 1.22.2, or 1.21.1 should update immediately as there is no workaround.

Impacted Technologies

VendorProductVersion(s)CPE
< 1.21.1CPE matchmatch criteria
cpe:2.3:a:htslib:htslib:*:*:*:*:*:*:*:*
>= 1.22, < 1.22.2CPE matchmatch criteria
cpe:2.3:a:htslib:htslib:*:*:*:*:*:*:*:*
1.23CPE matchmatch criteria
cpe:2.3:a:htslib:htslib:1.23:*:*:*:*:*:*:*

CVSS Data

CVSS version used by this source: 4.0

6.9MEDIUM

CVSS:4.0/AV:N/AC:L/AT:N/PR:N/UI:N/VC:L/VI:N/VA:L/SC:N/SI:N/SA:N/E:X/CR:X/IR:X/AR:X/MAV:X/MAC:X/MAT:X/MPR:X/MUI:X/MVC:X/MVI:X/MVA:X/MSC:X/MSI:X/MSA:X/S:X/AU:X/R:X/V:X/RE:X/U:X

Attack Vector
NETWORK
Attack Complexity
LOW
Attack Requirements
NONE
Privileges Required
NONE
User Interaction
NONE
VS Confidentiality
LOW
VS Integrity
NONE
VS Availability
LOW
SS Confidentiality
NONE
SS Integrity
NONE
SS Availability
NONE
Exploit Maturity
NOT_DEFINED
CvssVersion
4.0

Exploit Intelligence

EPSS Score
0.52%
Probability of exploitation in next 30 days
EPSS Percentile
41.0%
Percentile rank of EPSS score among Peer Group
As of 2026-07-27
Model: v2026.06.15
This CVE's current EPSS score of 0.0052 is in the 20th percentile among its peer group of 36,862 CVEs.

Social Chatter

The average CVE in this peer group has 0.0 Twitter, 0.1 Reddit, 0.3 Bluesky, 0.3 Mastodon, and 2.4 GitHub mentions.

Media Mentions

No media coverage found for this CVE.

The average CVE in this peer group has 0.3 InfoSec Media, 0.0 Vendor Blog, and 0.0 Security Researcher mentions.

Remediation

Remediation records are not available for this CVE.

References

github.com / samtools/htslib/commit/22ec5230ef95769ab009420da69568c7e530af28
Patch
github.com / samtools/htslib/commit/2a45eb129d703ad27f9fabc8169f0e94d3c69fa3
Patch
github.com / samtools/htslib/commit/4a5ef25eb1fb3d64438103316fffe423b2c3f5f4
Patch
github.com / samtools/htslib/security/advisories/GHSA-5cj8-mj52-8vp3
PatchVendor Advisory