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CVE-2026-31965

27
FAUCET Score

CVE-2026-31965 is a high-severity out-of-bounds read vulnerability in HTSlib, a library for bioinformatics file formats, affecting versions prior to 1.23.1, 1.22.2, and 1.21.1. The flaw occurs in the cram_decode_slice() function during CRAM record processing, where delayed validation of the reference ID field allows two out-of-bounds reads. Rated CVSS 8.2 (High), this vulnerability could lead to limited information disclosure or a denial-of-service condition due to program crashes. Despite its severity, the EPSS score is very low, and there is currently no evidence of active exploitation, public exploit code, or significant community discussion. Organizations are advised to update HTSlib to a patched version, as no workaround exists.

Impacted Technologies

VendorProductVersion(s)CPE
< 1.21.1CPE matchmatch criteria
cpe:2.3:a:htslib:htslib:*:*:*:*:*:*:*:*
>= 1.22, < 1.22.2CPE matchmatch criteria
cpe:2.3:a:htslib:htslib:*:*:*:*:*:*:*:*
1.23CPE matchmatch criteria
cpe:2.3:a:htslib:htslib:1.23:*:*:*:*:*:*:*

CVSS Data

CVSS version used by this source: 4.0

6.9MEDIUM

CVSS:4.0/AV:N/AC:L/AT:N/PR:N/UI:N/VC:L/VI:N/VA:L/SC:N/SI:N/SA:N/E:X/CR:X/IR:X/AR:X/MAV:X/MAC:X/MAT:X/MPR:X/MUI:X/MVC:X/MVI:X/MVA:X/MSC:X/MSI:X/MSA:X/S:X/AU:X/R:X/V:X/RE:X/U:X

Attack Vector
NETWORK
Attack Complexity
LOW
Attack Requirements
NONE
Privileges Required
NONE
User Interaction
NONE
VS Confidentiality
LOW
VS Integrity
NONE
VS Availability
LOW
SS Confidentiality
NONE
SS Integrity
NONE
SS Availability
NONE
Exploit Maturity
NOT_DEFINED
CvssVersion
4.0

Exploit Intelligence

EPSS Score
0.37%
Probability of exploitation in next 30 days
EPSS Percentile
29.9%
Percentile rank of EPSS score among Peer Group
As of 2026-07-27
Model: v2026.06.15
This CVE's current EPSS score of 0.0037 is in the 10th percentile among its peer group of 51,485 CVEs.

Social Chatter

The average CVE in this peer group has 0.0 Twitter, 0.0 Reddit, 0.1 Bluesky, 0.1 Mastodon, and 0.4 GitHub mentions.

Media Mentions

No media coverage found for this CVE.

The average CVE in this peer group has 0.1 InfoSec Media, 0.0 Vendor Blog, and 0.0 Security Researcher mentions.

Remediation

Remediation records are not available for this CVE.

References

github.com / samtools/htslib/commit/9cefb46453ad471e933b8212d4f45920524d3357
Patch
github.com / samtools/htslib/security/advisories/GHSA-mqm2-v645-3qhr
PatchVendor Advisory